| Graduate Year | Name | Thesis |
| 2010 | Ta-Chien Chan | Surveillance and Epidemiology of Influenza in Taiwan (Co-advise with Dr. Chwan-Chuen King) |
| 2008 | Mei-Hsien Lee | Two methods in association analysis (1) Likelihood ratio test with clustered haplotypes; (2) Kernel canonical correlation analysis (Co-advise with Dr. Su-Yun Huang) |
| 2008 | Pei-Chun Chen | Support vector machines : classification with coding and regression for gene selection (Co-advise with Dr. Su-Yun Huang) |
| 2006 | Hwai-I Yang | Hepatitis B virus related factors and the risks of liver cirrhosis and hepatocellular carcinoma (Co-advise with Dr. Chien-Jen Chen) |
| 2005 | Miao-Yu Tsai | Bayesian inference of variance components in generalized linear mixed model |
| 2004 | Shu-Hui Wen | Multiple hypothesis testing in large-scale association studies |
| 2004 | Yi-Lang Tong | Semiparametric Bayesian analysis of mixed models for clustered data |
| 2002 | Ching-Wei Chang | Bayesian marginal inference via optimal volume-corrected Laplace method and marginal likelihood identity (Co-advise with Dr. Su-Yun Huang) |
| Graduate Year | Name | Thesis |
| 2010 | Hsiu-Lien Hung | Incidence and Determinants of Seroclearance of Hepatitis B e Antigen and Its Association with Risk of Liver Cirrhosis and HCC (Co-advise with Dr. Chien-Jen Chen) |
| 2006 | Charlotte Wang | Maximum number of live births per donor in artificial insemination based on incidence rate and coefficient of inbreeding |
| 2006 | Pei-Yun Lu | Prior specification and Bayesian inference for kappa |
| 2005 | Yu-Chung Wei | Application of mixture model for multiple testing |
| 2005 | Cheng-Hong Lin | Design consideration of two stage multiple testing procedure |
| 2005 | Hui-Chi Hsu | The application and limitation of kappa statistics in assessing agreement |
| 2004 | Wei-Ming Wang | Application of Bayesian intrinsic random effect model to contaminated soil |
| 2003 | Hsiu-Ling Chang | A proposal of inference for correlation in longitudinal studies |
| 2003 | Yu-Hsian Deng | Family study of nasopharyngeal carcinoma in Taiwan cumulative incidence and risk factors (Co-advise with Dr. Chien-Jen Chen) |
| 2003 | Pei-Chun Chen | Bayesian inference of REML estimators of variance components |
| 2003 | Hsin-Nan Li | 在樣本完全隨機闕失之多重插補方法的比較分析(Co-advise with Dr. Hong Chen) |
| 2002 | Shu-Hui Wu | Inference of genetic variance of QTL via variance-component model |
| 2002 | Wai-Kei Lei | Extended twin study on the heritability of refractive errors (Co-advise with Dr. Chien-Jen Chen) |
| 2002 | Ho-Min Chen? | Inference of correlation in mixed effects models for longitudinal studies |
| 2001 | Shiang Chen | Comparing five methods for estimating recombination fraction with application of nuclear family data (Co-advise with Dr. John Jen Tai) |
| 2001 | Mei-Hsien Li | Bayesian inference of extra-binomial variability |
| 2001 | Pi-Ju Kao | Application of logistic regression to covariance-structure modeling of sib pairs’ common environments in QTL linkage analysis (Co-advise with Dr. John Jen Tai) |
| 2000 | Yea-Li Hwang | Application of self-contained subsets method to estimation of twin concordance for dichotomous traits (Co-advise with Dr. John Jen Tai) |
| 2000 | Huan-Jan Chang | Bayesian analysis of familial aggregation |
| 1998 | Ching-Wei Chang | A Nonparametric-Metropolis estimate of Bayes factor (Co-advise with Dr. Shu-Hui Chang) |
| 1998 | Yi-Huei Wu | On the intractability of ascertained genetic data (Co-advise with Dr. John Jen Tai) |
| 1997 | Jung-Ying Tzeng | Spatial model selection using Bayes factor and ratio of variabilities (Co-advise with Dr. Chien-Jen Chen) |
| 1997 | Mei-Jen Gee | The Communication Characteristics of Betel-nut Information among Adults in Taiwan (Co-advise with Dr. Lee-Lan Yen) |
| 1996 | Wei-Shing Liaw | An asymptotic approximation to posterior mode using likelihood and prior information (Co-advise with Dr. Hung Chen) |
| 1996 | Huei-Yi Lin | Betel-chewing Prevention Intervention Research (Co-advise with Dr. Lee-Lan Yen) |
| 1995 | Zi-Jie Lin | An application of analysis of mixture distributions to some liability indicators of schizophrenia (Co-advise with Dr. Wei-Jen?Chen) |
